Open Source Software
1. Creating VOPs for Siemens 7T systems
Link: https://gitlab.com/cfmm/siemens/matlab/createvops (Access limited to Siemens users and can be requested from kgilbert at robarts.ca)
Reference: Gilbert KM et al. NMR in Biomedicine. 2020
2. Tool for offline RF Shimming
Link: https://gitlab.com/cfmm/matlab/offlineb1shimming
Reference: none
3. MatMRI: A GPU enabled package for model based MRI image reconstruction
Links
Releases: doi.org/10.5281/zenodo.4495476
Development (gitlab): https://gitlab.com/cfmm/matlab/matmri
References
Cite as: Baron, Corey A. (2021). MatMRI: A GPU enabled package for model based MRI image reconstruction (0.1.00). Zenodo. https://doi.org/10.5281/zenodo.4495477
Additional references for certain functionality can be found in the README.md file in the package.
Contact: Corey Baron, corey.baron@uwo.ca
4. Hippunfold:Snakemake BIDS app for hippocampal unfolding & subfield segmentation
Links:
https://hippunfold.readthedocs.io/en/latest/
https://github.com/khanlab/hippunfold
References:
Cite as: Khan, Ali, DeKraker, Jordan, & Haast, Roy. (2021). Hippunfold: Snakemake BIDS app for hippocampal unfolding & subfield segmentation (v0.3.0). Zenodo. https://doi.org/10.5281/zenodo.4488922
Contact: Ali Khan, alik@robarts.ca
